This is Penn State

Predictions

 

RNABindRPlus predicts RNA-binding residues from protein sequences by combining the output from a Support Vector Machine (SVM) classifier with the output from a Homology-based method. The old version of RNABindR (cited in Terribilini et al. 2007) is no longer maintained. A local version of RNABindRPlus is available, see the github repo here to get started: RNABindR-Local:. This local version requires database files (~50 GB uncompressed) available here Download .

User input

Your e-mail address

(Please enter a valid email address. We will send the prediction results to you via email. A wait of approximately 10 minutes per sequence submitted is typical.)

Job Title

1. Paste query AMINO ACID sequence(s) in FASTA format

Click here for an example


Optional.
Remove highly similar proteins with % sequence identity from homolog list
See Instructions for more details.

   


If you have a list of structure files for which you would like to calculate interface residues, please visit PRIDB.